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Finding homozygotes with SNP of interest

Hello,

I am a very new person in genetic variation analysis, so my question may be very simple.

I am interested in the SNP rs764867354 in SidT2 gene that leads to loss of a start codon. (http://www.ensembl.org/Homo_sapiens/Variation/Explore?db=core;g=ENSG00000149577;r=11:117178733-117197445;v=rs764867354;vdb=variation;vf=130560261). I want to know if homozygotes for this SNP have been ever found among the sequenced genomes. What should I do to find this out?

Thanks!

snp ensembl homozygote
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updated by Emily Emily • written by andrey.v.shubin andrey.v.shubin

2 answers

Your best resources for that would be ExAC and gnomAD.

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written by WouterDeCoster WouterDeCoster

Thank you, I have found exactly what I need.

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written by andrey.v.shubin andrey.v.shubin

Go to the population genetics page which will display genotype frequencies if these are available. If they're not, then click through to the original submitter and see if they have more information.

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written by Emily Emily

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