This is a test version of Biostars. For the public version, visit https://www.biostars.org.
problem in the istallation of CNVnator

hello,

i am beginner in this field, I am trying to install CNVnator but there is error when "make" in the cnvnator/src . please tell me because I can not understand it thanks

Compiling with parallel (OpenMP) support g++ -O3 -std=c++11 -DCNVNATOR_VERSION=\"v0.3.3\" -fopenmp -o cnvnator obj/cnvnator.o obj/EXOnator.o obj/HisMaker.o obj/AliParser.o obj/Genotyper.o obj/Interval.o obj/Genome.o samtools/libbam.a samtools/htslib-1.3.1/libhts.a -lz -L/lib -lCore -lRIO -lHist -lGraf -lGpad -lTree -lMathCore /usr/bin/ld: cannot find -lCore /usr/bin/ld: cannot find -lRIO /usr/bin/ld: cannot find -lHist /usr/bin/ld: cannot find -lGraf /usr/bin/ld: cannot find -lGpad /usr/bin/ld: cannot find -lTree /usr/bin/ld: cannot find -lMathCore collect2: error: ld returned 1 exit status make: * [cnvnator] Error 1

genome

Did you install ROOT?

0 answers

No answers yet.

Log in to answer this question.