"unused argument (validate = FALSE)": package "gcrma"
Hello,
I am using the function "gcrma (data, fast = T)" from package "gcrma", where "data" is an "AffyBatch" in my R session, but it always gives "Adjusting for optical effect.Error in assayDataElementReplace(object, "exprs", value, validate = FALSE) : unused argument (validate = FALSE)"
Does anyone know how to resolve?
Thanks,
Jianhai
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Paste the command you use please.
Sounds like "validate" is not a valid argument for the command so needs to be deleted from the command.
Also post your
sessionInfo()and make sure you are using the latest version of all packages which are currently loaded for this. This looks like an outdated-package-issue.Hello zhang.jianhai!
It appears that your post has been cross-posted to another site: https://support.bioconductor.org/p/96372/
This is typically not recommended as it runs the risk of annoying people in both communities.
Hello WouterDeCoster, Sorry for the inconvenience, I will remove this post.