Thank u so much ,, its helpful
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How to characterize synonymous and non-synonymous substitution from variants data
Assalam o alikum everyone
I have vcf files of dog genome which contains variants data and i want to characterize synonymous and non-synonymous substitutions from these variants. Any advice how to do so? kindly tell me is there any tool ?
I am new in this field so happy to give more info Thanks in advance Adeena
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1 answer
please read this answer it will help:
A: Synonymous And Non-Synonymous Snps
after reading that, you could annotate your SNPs using for example:
VEP or SnpEff
both tool are very convenient
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