This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Installation of Perl Modules

How to install all perl modules in single command required to run circos on CentOS linux platform?

Installed perl version :

[root@psgl software]# perl -v

This is perl 5, version 16, subversion 3 (v5.16.3) built for x86_64-linux-thread-multi

Circos required some additional perl modules:

[root@psgl software]# /home/yog/software/circos-0.69-3/bin/circos

* REQUIRED MODULE(S) MISSING OR OUT-OF-DATE *

You are missing one or more Perl modules, require newer versions, or some modules failed to load. Use CPAN to install it as described in this tutorial

http://www.circos.ca/documentation/tutorials/configuration/perl_and_modules

missing Config::General
  error Can't locate Config/General.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 8) line 1.

missing SVG
  error Can't locate SVG.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 70) line 1.

missing Regexp::Common
  error Can't locate Regexp/Common.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 49) line 1.

missing Math::Bezier
  error Can't locate Math/Bezier.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 34) line 1.

missing Math::Round
  error Can't locate Math/Round.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 37) line 1.

missing Math::VecStat
  error Can't locate Math/VecStat.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 38) line 1.

missing Text::Format
  error Can't locate Text/Format.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 74) line 1.

missing Set::IntSpan
  error Can't locate Set/IntSpan.pm in @INC (@INC contains: /home/yog/software/circos-0.69-3/bin/lib /home/yog/software/circos-0.69-3/bin/../lib /home/yog/software/circos-0.69-3/bin /root/perl5/lib/perl5 /usr/local/lib64/perl5 /usr/local/share/perl5 /usr/lib64/perl5/vendor_perl /usr/share/perl5/vendor_perl /usr/lib64/perl5 /usr/share/perl5 .) at (eval 50) line 1.
software error

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