Entering edit mode
7.0 years ago
xgdong912
▴
10
Dear all I'm trying to identify IBD segments by running beagle software as the commond below:java –Xmx1000m –jar beagle.r1399.jar gt=JY_new.vcf ped=JY_ped.txt ibd=true out=jy, the input file contains data of 28 chromosomes , I'm confused that it only has information of two chromosomes in the result file jy.vcf, it's my first time to analyze IBD, is the result normal or I just made a mistake? Thank you!
