Motifs from mutations in RNAseq

Question

[Ron]

Hi all,

I am doing mutation analysis on RNAseq using rnaseqmut ( https://github.com/davidliwei/rnaseqmut ) .Is there any way to annotate mutations with the actual motifs? I want to look if some mutations lie in specific motifs of interest e.g. CCAUCG

Thanks,

Ron