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Removing redundancy in structure level

Hi All,

I have downloaded all available human proteome structure from PDB, normally there will be redundancy in structures (Different structures are deposited in PDB for single protein, how to download only non-redundant best models in bulk), facing trouble in removing the redundancy in structure level and to download only non-redundant data.

Another thing is, in modbase contains the structure which is present in PDB data as well as theoretically identified model. How to identify the repeated structures?

Thanks.

protein structure modebase pdb redundancy

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written 9.3 years ago by Nitha •

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