IGV Could not create index file when loading GFF3
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7.0 years ago
emurb ▴ 10

Hello,

I am trying to use IGV for the first time and I can't load my gff3 because I got these errors : "Could not create index file" "Fasta file has uneven line lengths in contig null"

The permissions are 777, I don't understand. Can you help ?

Thank you,

IGV GFF3 • 7.4k views
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Entering edit mode

Probably a problem of how you are loading it. You should have to add a track line. Look at the link.

Alternatively look your answer here and here

Just one more thing, please try to find the questions in google first, it helps you learn the tricks of text mining and you will find that your queries are already addressed, if not you will always have help from here. Also, we encourage you to rephrase queries which might not be understandable for everyone to address.

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