How to determine if a sequence is nonsatellite sequence?
0
0
Entering edit mode
7.0 years ago
bbb ▴ 70

How to determine if a sequence is nonsatellite sequence? For example, I want to determine insertion of nonsatellite sequences in reads

satellite dna sequence • 1.2k views
ADD COMMENT
1
Entering edit mode

To find out, scan your sequence with RepeatMasker Web Server.

ADD REPLY
0
Entering edit mode

Simplest solution: Align things against a bunch of satellite sequence. If they don't align, then you have non-satellite sequence.

ADD REPLY

Login before adding your answer.

Traffic: 1964 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6