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How to determine if a sequence is nonsatellite sequence?
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3.7 years ago
bbb • 60
@bbb22014

How to determine if a sequence is nonsatellite sequence? For example, I want to determine insertion of nonsatellite sequences in reads

satellite dna sequence • 535 views
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To find out, scan your sequence with RepeatMasker Web Server.

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Simplest solution: Align things against a bunch of satellite sequence. If they don't align, then you have non-satellite sequence.

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