Hii I have a list of gene including their ensembl ID and transcript ID. I have to retrieve information related to gene like number of exon and intron in each gene. can anybody suggest me from where i can retrieve such information either by FTP or any other mean like i upload gene list and it retrieve me gene feature that particular gene have that number of exon and intron.
gene ensembl id gene name havana_transcript_id gene location gene orientation gene feature
ENSG00000165863 C10orf82-004 OTTHUMT00000460064 116663799-116669955 - 6 exon and 7 intron
ENSG00000089876 DHX32-002 OTTHUMT00000050946 125836337-125854859 -
ENSG00000148737 TCF7L2-008 OTTHUMT00000050418 113152414-113165961 +
ENSG00000165813 CCDC186-001 OTTHUMT00000050450 114124929-114144602 -
this is example file for reference.... Thanks in advance
1 answer
Use EnsEMBL's API or BioMart.
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