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7.1 years ago
n.verburg
•
0
Dear all,
Does anyone know if it is possible to run the ABSOLUTE algorithm on copy number data derived from a Illumina 450k bead array (by using ChAMP or conumee package)?
I have tried to run the R version of ABSOLUTE and the GenePattern site but they only allow the select a SNP array.
Thank you.
Best,
Niels Verburg, MD PhD candidate Neurosurgical resident VU university medical center, Amsterdam, The Netherlands
Yes - I think that this should be possible. Please see a related question: Ploidy Analysis in R