problems on hierarchical clustering
Wondering if anyone can help me to sort out a bug. I tried to use the Fluidigm Singular package analyzing a group of qPCR results but always comes up an error “Error in as.hclust.dendrogram(hc_i) : dendrogram entries must be 1,2,..,27 (in any order), to be coercible to “hclust””. I have tried reorganising my data format and checked the raw script of the cluster function but the problem still exist. Thanks a lot.
• 2,475 views
•
link
updated
by
Simply Bioinformatics
•
written
by
calvinhuapeng •
•
written
by
calvinhuapeng •
1 answer
One way to get rid of this bug is to downgrade your R version to 3.0.2. ¯\_(ツ)_/¯
or use R-Switch for multi-version R on MAC: https://r.research.att.com/#other
• 0 views
•
link
written
by
Simply Bioinformatics
Log in to answer this question.
I think that the function required a list with more then two elements. It's clear by the stopifnot closure, try to pass each integer as list element using vector function !