Does anybody know de novo assembler which can assemble reads of 300 bp which are generated by Illumina MiSeq series sequencers?
Hello All, I would like to know that are there any de novo assembler which can assemble reads of 300 bp which are generated by Illumina MiSeq series sequencers?
• 1,857 views
•
link
written
by
saranpons3
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Construction of single sequence assembly out of contigs
written by Bushra Bibi
-
Denovo genome assembly with multiple insert size libraries, both short and long reads
written by sunnykevin97
-
Guidelines to choose K-mer size for De bruijn graph based assembly (2nd generation sequencing reads…
written by saranpons3
-
Why we need a distributed assembler based on MPI/Mapreduce when we can store Debruijn graph in a co…
written by saranpons3
-
How denovo assemblers handle N's in reads?
written by saranpons3
-
Is De-Bruijn graph only the best approach for assembling short reads from 2nd generation sequencing…
written by saranpons3
-
Complete genome, simulated reads of any organism for which complete genome is already determined
written by saranpons3
-
De novo genome assembly strategy
written by joneill4x
-
DNA de-novo assembly for plants different than rest organisms?
written by chefarov
-
Merge 2 de novo assembly generated using Trinity?
written by nbvasani
Have you tried googling "short read assembly tool"?
What type of data are you working? What is your end goal?