Hi everybody,
I'm trying to install the s.pombe genome in ngsplot, to do that I've tried to download the genome found in the google drive folder. The problem arrived when I see in the wbsite https://github.com/shenlab-sinai/ngsplot and the reference for S.pombe is Asm294 and when I look up in https://github.com/shenlab-sinai/ngsplot/wiki/SupportedGenomes the reference is Asm852v1. Does any body know what is the correct reference?
Thank!
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Lila M
1 answer
I was looking into this today for a user. I think Asm852v1 is actually H.pylori. ASM294 Should be the correct genome but they only have a download for version 1 and 2 of their program. I've failed so far to alter their code to enable a download from ensembl fungi.
If anyone has a pombe tarball for version 3 please let me know.
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