CONVERT GFF TO GTF
I am trying to use Hisat2 script to extract exon and splice site using this GFF File from this database named as Rs.1.0 Gene
link: http://radish-genome.org/Data_resource/
But these scripts need GTF file,please suggest how I convert GFF file to GTF file.
$extract_exon.py $extract_splice_sites.py
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Jeffin Rockey
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Bioinfonext
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Bioinfonext
2 answers
You can use gffread
gffread gene.gff -T -o gene.gtf
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Satyajeet Khare
I hope the answers of this post will help you with the requirement.
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Jeffin Rockey
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