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Can not import Blast search result on Genius to MEGAN6

I am trying to analyze NGS data.

  1. I receive NGS data.
  2. I de novo assembled them in Geneious, resulted in 8000 contigs.
  3. I blast all contains in Genious.
  4. Now I have 8000 blast results in Genious. I would like to transfer this data to MEGAN to analyze.

I am having a problem to transfer blast results in Genous to MEGAN. I do not know which file type I should export in genious.... I stuck here over 3 weeks... any help would be appreciated!

Thank you.

next-gen genious megan

I've exported Geneious BLAST results in .txt, .xml, and .sam. None of these worked with "Import BLAST" in MEGAN. Interested to see if this gets solved.

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