This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Installation of the Subcloneseeker

I have installed SubcloneSeeker

git clone https://github.com/yiq/SubcloneSeeker.git

cd SubcloneSeeker

make

make check

Success: 24 tests passed. Test time: 0.00 seconds.

Running the examples

cd examples/01-simulation

./sim.sh

error:

The SubcloneSeeker project is not properly built. /utils/ssmain is missing. Please double check

utils:


cluster2db

cluster2db.cc cluster2db.o

CoexistanceTable.cpp

CoexistanceTable.h

CoexistanceTable.o

colocal_matrix

colocal_matrix.cpp

colocal_matrix.o

Makefile

segtxt2db

segtxt2db.cc

segtxt2db.o

ssmain

SubcloneSeeker.cc

SubcloneSeeker.o

treemerge

treemerge.cc

treemerge.o

treemerge_p.cc

treemerge_p.h

treemerge_p.o

treemerge.test

treemerge_test.cc

treemerge_test.o

treeprint

treeprint.cc

treeprint.o


If anyone else has encountered a similar problem or have any insight into this I would appreciate it.

software error

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