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Where to download the Refseq gene definition file?

I am looking for the coordinates of the genes for hg19. In hg17/hg18, there used to be a file with the following format:

name    chrom   strand  txStart txEnd   cdsStart    cdsEnd  exonCount   exonStarts  exonEnds    name2   hg17.refLink.product    hg17.refLink.protAcc    
hg17.refLink.geneName   hg17.refLink.locusLinkId
NM_001005484    chr1    +   58953   59871   58953   59871   1   58953,  59871,  OR4F5   olfactory receptor, family 4, subfamily F,  NP_001005484    184539  
79501
NM_001005224    chr1    +   407521  408458  407521  408458  1   407521, 408458, OR4F3,OR4F3,OR4F3,  olfactory receptor, family 4, subfamily F,  NP_00100
5224    184653  26683
...

I am looking for something similar if not identical to the above.

Thanks in advance.

gene
• 1,670 views • link
updated by Shicheng Guo Shicheng Guo • written by moxu moxu

2 answers

Download it from:

https://yunpan.cn/cMiAu5SfzaqFK

with passwd: 69a5

• 1 views • link
written by Shicheng Guo Shicheng Guo

You can use the UCSC table browser selecting the chosen genome version. In output you can use "Selected fields from primary and related tables" and then choosing related ids.

• 1 views • link
written by microfuge microfuge

Thank you, microfuge! I thought there was something that one could download from NCBI.

• 1 views • link
written by moxu moxu

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