Obtaining 5`UTRs alignments
Hello everyone, is there an easy way to obtain 5'UTR alignments for several species? I found that I could get 5`UTR for particular genes using UCSC, is there any way to get them all as the multiple alignment?
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Did I understand correctly that for one gene you want to have a multiple alignment for a number of species?
Scroll down this page until you find multiple alignments. See if you can use those. Underlying alignment file that displays those on the web is one of the collection there.