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R script/package to plot mutation comparision in cancers

Hi Everyone, I want to compare most recurrent mutations in different colon cancers mentioned below (mock data). What I want to do is plot beautiful looking chart showing the both common and unique mutations in these cancer. Can someone please suggest me some R package or share any R script to do this job?

mutations             Adenocarcinoma %                  colorectal lymphoma%                  leiomyosarcoma%   squamous cell carcinoma%
TP53                         20                                      10                             40                              15
CDKN2A                       40                                                                     20                              22
PTEN                                                                  0                             29
r

Is there anything specific to this data that differentiates it from a general data set?

The R library ggplot2 allows custom visualization of data you have here.

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