DNASE2TF + HOMER

How to connect the DNASE2TF output and use HOMER to find the motifs? Has anyone tried this before?

The output of DNASE2TF is as follows:

chr start stop p-value

chr19 3282559 3282569 -3.082207

So, basically with this above BED formatted file how to approach in searching MOTIF using HOMER.?

dnase rna-seq chip-seq homer

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updated 10.0 years ago by Satyajeet Khare

• written 10.0 years ago by startup_biostar •

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