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Any materials explaining BWA and Bowtie algorithm?

Hi, Biostars.

I would like to understand main mapping tools's agorithm, especially BWA, Bowtie.

Anyone know any materials (not source code, slide,etc) for my purpose ?

Thanks.

genome sequencing rna-seq dna
• 10,500 views • link
updated by Nicolas Rosewick Nicolas Rosewick • written by cfarmeri cfarmeri

2 answers

Here's a nice introduction to Burrows-Wheeler Transform used in BWA and bowtier; and also read mapping - by David Gifford :

• 1 views • link
written by Nicolas Rosewick Nicolas Rosewick

BWA

BWA MEM Algorithm

Bowtie

Alignment algorithm

• 1 views • link
written by Medhat Medhat

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