I keep getting an error when running Spades
I am trying to run spades on server but I keep getting the following error: == Error == system call for: "['/opt/spades/bin/spades']" finished abnormally, err code: -8
Does anyone know what seems to be the problem?
• 2,239 views
•
link
updated
by
djurdjica.marosevic •
•
written
by
yann_sh •
•
written
by
yann_sh •
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Kmergenie install bug
written by joshua.j.wright •
-
SPAdes error: finished abnormally, OS return value: 21
written by jiyoung •
-
Spades
written by saifulislam99121 •
-
metaSPAdes de novo assembly error
written by Cedrick •
-
SPAdes running out of ram !!!!
written by elbarchef •
-
Increase memory limit in SPAdes-3.6.1
written by ashaneev07 •
-
MetaSpades can't access memory? Crashes when requesting 45 Gigs on a 128 Gig RHEL6 machine
written by jnowacki
-
SPAdes: <jemalloc>: Error in malloc(): out of memory
written by Paul
-
System Error in SPADES during fungal denovo-genome assembly?
written by jigarnt •
-
SPAdes hybrid assembly bailing at last step - Error code -10?
written by kevbonham •
You can try sending an email to SPAdes support (spades.support at bioinf.spbau.ru).
Hi, I keep getting the same error, was wondering if you got any reply on it ibrahim.el.hamamy from the SPAdes support?
You may have better luck emailing SPAdes support yourself. Please come back and post their answer if you do.