Origin of SNP of interest
Hi,
I have a set of plant cultivars (all breeder lines). For each cultivar, I have SNP data (from an GBS experiment) and pedigree data. The set is no crossing population
After identifying some interesting SNPs, I would like to predict the latest common ancestor or a set of common ancestors that probably contains the SNP.
Is there any software out there for this task?
best regards, Jens
1 answer
This might be helpful
http://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-15-162
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