I have 5 Pseudomonas genomes sequenced from Ion Torrent PGM, MIRA4 was used for genome assembly and there genome annotation was done by RAST. I do want to carry out some further comparative analysis within these 5 genomes, so that I can submit it in a good journal. Can you people suggest me some papers where they have carried out some comparative analysis, from which I could get some help.
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written
by
glady
1 answer
See these biostars.org posts:
Software For Analysis Of Bacterial Genomics.
Tools for comparative genomics through genome/pangenome maps
A: How To Find Proteins Related To Patogenicity Of A Bacteria ?
See these papers:
https://holtlab.net/2015/02/25/tools-for-bacterial-comparative-genomics/
https://microbialinformaticsj.biomedcentral.com/articles/10.1186/2042-5783-3-2
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