Hi All, I have written a program to analyze genotype SNP data in R and wanted to submit it as a bioconductor package. However, this …

I saw this graph (http://www.nature.com/nature/journal/v476/n7359/fig_tab/nature10251_F2.html) and was wondering how did those information add to this graph. R package "qqman" seems not provide this function Does …

Dear all, do anyone know any R package or program can produce this figure. I could not find such a thing in Maftool or GenVisR. …

Hi all, I'm new in this field, and I tried to cluster some TCGA cancer patients for further survival analysis. Just as the TCGA nature …

<p>Slight different HAS2 hyaloran synthase in naked mole rat was find in <a href='http://www.nature.com/nature/journal/vaop/ncurrent/full/nature12234.html'>http://www.nature.com/nature/journal/vaop/ncurrent/full/nature12234.html</a> But in GeneBank and ncbi.nlm.nih.gov no mention about this modification. I …

<p>I have a question about the statement "Branches corresponding to partitions that were reproduced in less than 50% of bootstrap replicates are collapsed". In the …

<p>I need to plot 73 mutations on a large gene for a publication. Th mutations of course must be correctly placed on the gene according …

<p>Hi,</p> <p>I'm wondering if anyone is aware of datasets for which there is publicly available microarray and RNA-seq data on the same samples?</p> <p>So far …

<p>Hi,</p> <p>I have a question about how health status and abundance of bacteria are correlated using PCA in this paper (<a href="http://www.nature.com/nature/journal/v464/n7285/full/nature08821.html">A human gut microbial …

<p><strong>Why do population stratification using SNPs mirror geography?</strong> </p> <p>It is not intuitively clear why allele-frequencies and geographical distances (latitude and longitude) should even have …