I have data from HELP tag sequencing

The output looks as follows:

1 chr1 350 3.5467 3.5918

2 chr1 20066 0.0000 2.6648

3 chr1 27464 0.0000 2.9885

4 chr1 29783 0.0000 0.5977

7 chr1 32795 0.0000 0.8966

8 chr1 33137 0.0000 14.3449

19 chr1 43680 0.0000 0.8966

20 chr1 43924 13.1247 2.4425

21 chr1 45775 0.0000 5.3793

The column headers are likely

chr pos m-score conf

Are there relevant data analysis packages (such as in Bioconductor) that can aid in curating these dataset?

Thanks!