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How To Remove Contamination From Ngs 454 Sequencing Data

hi

i am new in the field of ngs data analysis and want to learn about that. i have some 454 sequencing reads but that contains mixed and contaminated sequenced reads from source and repeats that i want to remove or partition them. please suggest me any solution if anyone knows.

thank you in advance.

next-gen data analysis

1 answer

You can use DeconSeq, as it was specifically designed for removing contamination from 454 reads.

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