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Classify species text file by Kingdom

Hello!

Time ago I assembled a Transcriptome and ran BLASTx on it to get info about what contained, now I filtered the data and made a file with all species with hits on the transcriptome contigs.

Anyone has a good tip to organize & classify that data? I would like to know what % of it corresponds to Bacteria, Fungal, Plant, etc info based on Kingdom.

Thanks in advance!

rna-seq specie transcriptome

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