psiblast query no output and no error
background: -running on linux 14.04
-using nr database for proteins
-the chain_A from 1B72, that has been separated based the chain identifier
i'm sure I download blast and the database properly since
psiblast -subject chain_A.fasta -in_msa chain_A.fasta -out_ascii_pssm chain_A.pssm
actually returns a txt file, but when I try to do
psiblast -query chain_A.fasta -db nr -out_ascii_pssm chain_A.pssm
the terminal just halts and gives no output, not even errors I don't know what to do at this point
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