Entering edit mode
8.1 years ago
acataldo
•
0
Good evening all, I'm rather nascent in my bioinformatic education but have been tossed into the field. I'm still learning Pymol and Chimera, but I am having difficulty finding information on how to do loop swaps? Say two similar proteins have a n-Src loop between two beta strands and I want to swap one out for the other? I'm still getting my feet wet in Modeller, but I would greatly appreciate any information or pointing in the right direction towards a tutorial outlining how to do and save loop swapped .pdbs to determine some ligand docking in Chimera/Pocketdock/Dock6. Thanks so much for your time and your contribution to this fascinating field!
