What is the best and fast way to acess query coverage from tBLASTn Local on windows?

I was using the UGENE but it cant provide the query coverage yet. Do you guys know another tool that can provide this info?

Thanks!

blast alignment

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updated 3.1 years ago by Ram

• written 10.4 years ago by soza •

1 answer

Use command-line Blast with -outfmt, see this thread here, the NCBI Blast manual here, or tblastn -help

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written 10.4 years ago by h.mon

do you know what outfmt can provide this info? there is a lot of options

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written 10.4 years ago by soza •

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