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Ref_seq DNA seq extraction

I have ref_seq proteins, i wanted its DNA sequence from NCBI how can it get using proteins ref_seq ids?

ref_req ncbi proteins dna
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updated by David Langenberger David Langenberger • written by amish • amish

1 answer

Use the UCSC table browser to get the sequence for your ID(s).

  1. Select your species
  2. Choose group "genes" and track "RefSeq"
  3. Paste your list of IDs under "identifiers (names/accessions)"
  4. "output format" is "sequence"
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written by David Langenberger David Langenberger

Thanks for helping me . But i did'nt find option for plants at UCSC. I have plant refseq proteome data and i want DNA seq data of respective protein ids.

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written by amish • amish

That's because there are no plants in UCSC. :) Next time, try to be more precise with your question... that safes some time. With plants, I cannot help you. At least not in a simple way.

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written by David Langenberger David Langenberger

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