Java api or library to calculate hydrogen bonds of a protein
Hello every body.
I need a Java api or library for calculating hydrogen bonds of a given pdb file. Even a Web Service that calculates hydrogen bonds like this can be useful, because i need to call it from the program i am writing with Java.
Hello every body. I am using biojava 4.1 (a bioinformatics library for java) to analyze protein structure. I use following code to get secondary structure …
<p>Hello every body.</p> <p>I need to obtain coordinates of sidechain atoms from pdb file. Are sidechain atom coordinates stored in pdb files? How can i …
<p>Whats the best way to measure / count number of</p> <blockquote> <ul> <li>SS bonds (Disulfide bond)</li> <li>hydrogen bonds</li> <li>Hydrophobic Bonds</li> <li>Ionic Bonds - Salt Bridges</li> …