Hello, thank you for your time. Currently I am waiting for a reply by the technical support, I think they will help me soon. If I find a solution I will report it here. Otherwise, I will try to get in contact with you privately (as I am not allowed to display the sequences in public). In case, I would like to report your solution here (or you could do it as well if you like). Thanks again!
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Anima Mundi
Contact Invitrogen, seller of the software? Also if you want anybody to reproduce the error you should provide more info than: "fails with some sequences". Give acc nos/screen dumps, possibly with some non your private project files.
Hi, the point is that I would like to avoid to pay in order o get assistance if not strictly necessary (if so, I will provide them some dumps, thank you). The sequences are quite homogeneous, they all come from UCSC Genome Browser mouse mm9, they are all used to mark ORFs, start codons, possible primers and protein sequences. With one exception, they are about 2Kb long. Some of them, I do not know why, lose information if I save and reopen.