Forum: Has anyone used MutMap? I would like discuss on that tool.
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Can I use pplacer with a tree constructed in Fasttree?
written by pramirez •Hi All! I am trying to do phylogenetic placement of S3 amino-acid sequences using Pplacer. I created the reference tree based on a reference alignment …
-
Positional restraint energy is too big
written by Ammar Danazumi •Hello, I am running equilibration of protein system to prepare it for md simulation and I encountered a problem that says "Compute_Energy_Restraints_Pos> Positional restraint energy …
-
Trouble understanding "Join" operator of NCBI
written by PrasadHello, The Join operator is used for backsplicing events/split genes. Could anyone please provide additional details on interpretation of "Join" in case of pgRNA of …
-
Using BUSCO to predict gene functions with existing gff/gtf table?
written by zhousun21 •Hi all, I'm trying to predict gene functions for eukaryote genomes. I can get the gene models using GeneMark or Augustus. I'm having trouble assigning …
-
MutMap installation in Linux
written by arunpandey1 •Hi I am learner in area of Bioinformatics. I need you help/suggestion. I want to install MutMap in my Linux . plz help how to …
-
help geometadb r package
written by andreiareis1987 •Hi guys, I am new in Geometadb package in R! I have been doing some tests to understand how it works geometadb. Well my goal …
-
How to count SNPs, InDels
written by chchl7 •<p>I have used Bowtie 2 to align my reads to reference genome and Samtools to call variances (SNPs and InDels). Does anyone know how to …
-
Help require for gene regulatory network data
written by mohammad.shaheryar •Can anyone share the selected gene data matrix which he or she used for reverse engineering of gene regulatory network. most of the papers just …
-
Anyone used FIMO from MEME before?
written by datanerdHI all, Has anyone used the FImo from MEME suite before? I have a motif, have the JASPAR ID, Frequency matrix from jaspar. But Iam …
-
Has Any One Used Cummerbund
written by Varun Gupta<p>Hi I used cufflinks and generated several <strong>transcripts.gtf</strong> files for different genes. I found the name of <strong>CummeRbund</strong> in the manual of Cufflinks. Has anyone …