Estimate crossover and recombination ratio between snps?
Hi there,
I totally have around 200K SNPs in different chromosomes, and pedigree information (parent and their offspring) and their genotype data respectively.
I would like to estimate the recombination ratio between different genders, before this I have to estimate the crossover between the SNPs.
My question is: can anyone suggest me a software, package or method to estimate the crossover between targeted SNPs and further to estimate the recombination ratio between them?
Thanks for any advice and help
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