Tool: BrowserGenome.org: Really cool tool for RNA-seq
Hi,
I came across this really cool tool for RNAseq data visualization. I plan of using this soon. If anyone finds anything interesting about this tool, please do share.
Regards,
Mamta
rna-seq
visualization
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
single-cell RNA-seq power analysis
written by niu.shengyong •Hi there, Could you please recommend any good tool for single-cell RNA-seq power analysis? I've looked into some papers such as [this][1] and [this][2] , …
-
Forum: Update: CRISPR off-target effects causing unexpected mutations - good science or media hype?
written by BioinfGuruHi all, Im interested to hear peoples thoughts on the issues generated from [this recent highly publicised nature methods paper][1] regarding off target effects of …
-
Error indexing genome with STAR
written by zubenelHi, I have fastq file with 68 mln. 100 nt SE reads from human sample. I want to align them to human reference genome (hg38). …
-
How IUPAC ambiguity codes are represented in Burrows-Wheeler transform ?
written by Fadel •I am reading about Burrows-Wheeler transform and some tools which have adopted it like [BWA][1] and [HISAT][2] and I couldn't figure out how different IUPAC …
-
How to get the alignment summary of HISAT2
written by Wet&DryImmunologyHi, I was trying to HISAT2, which is suppose to be the improved version of tophat or tophat2, [HISAT publication][1] , I applied it to …
-
Tool: mRNA-miRNA target data analysis and visualization
written by datanerdHi all, [Here][1] is a new tool for visualization and analysis of miRNA and mRNA dataset. Hope its useful for other researchers in the field. …
-
Tool: Mitcr: A Software Tool For Analyzing T-Cell Receptor Sequencing Data
written by mikhail.shugayDear fellow Bioinformaticians, Allow me to introduce a recently published software tool [MiTCR: software for T-cell receptor sequencing data analysis][1] that allows extremely fast and …
-
Tutorial: Rna-Seq Review Papers
written by Istvan Albert## Review papers on the topic of RNA-seq ### General Guides - [Computational methods for transcriptome annotation and quantification using RNA-seq (May 2011)][1] in Nature …
-
Visualisation Of Multiple Gene Expression Profiles
written by David Westergaard<p>Hello,</p> <p>I have identified Gene Expression Profiles for 15 different vegetables, and I now wish to visualise the results. Normally, one could use a variety …
-
Download Target Sequencing Data And Whole Genome Of Same Individuals
written by Vikas BansalDear all, This may be a simple (or stupid) question for you all, but I did not get any solution. I want to download target …