I've run FastQC on a sample of Illumina RNA-Seq. It identifies issues with abnormal kmer counts: <img alt="kmers" src="http://i.imgur.com/4OTeVFs.png" style="height:600px; width:800px" /> There is the …

With what software tool can I reconcile the gene tree (obtained for orthologs using OrthoFinder) versus the species tree for ~ 30 plant species? I …

I need to draw the shape of peaks from different chip-seq samples. I want to get something like this picture, which I found on a …

<p>hello,</p> <p>I am doing a model based population structure analysis following Bayesian method in R. I have SNP data from 100 diploid individual. I am …

Hello, I am processing insect development paired-end RNA-seq data. Eight time points were select to prepare samples, several whole insects were put together to extract …

Hello all :) Some histone marks are referred to as generating 'broad peaks', whilst others 'narrow peaks'. Others, like Pol-II, might be somewhere in between. …

I am batch retrieving a few hundred codes that vary slightly in length and sometimes have XP rather than NP. In uniprot, from the dropdown …

Hello everyone I have performed quality analysis of RAW miRNA-seq data using FastQC. As a result, I got the following output and the encoding according …

Sort of a followup to https://www.biostars.org/p/101261/ For the first time in history we have reached 1 million unique users (generating 4.4 million page views) over …

I am very happy to announce an upcoming workshop, supported by **COST - Seqahead on microRNA/long non-coding RNA bioinformatics** During the past few years non-coding …