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Problem in DSSPParser and SecStrucPred classes in biojava packages.

I want to get Dssp file from pdb file. I have found few example doing this using DSSPParser and SecStrucPred classes.

https://github.com/biojava/biojava/blob/master/biojava-structure/src/test/java/org/biojava/nbio/structure/secstruc/TestDSSPParser.java

I looked into biojava packages but even in 4.1.0 I cant found them. In which package of biojava these classes are present?

secondary-structure-prediction biojava
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updated by Ram Ram • written by Janeeta Raja • Janeeta Raja

2 answers

The DSSPParser class is very recent and has not been part of any stable release as of yet. You can get it from a SNAPSHOT download or by checking out the latest code from GitHub.

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updated by Ram Ram • written by andreas.prlic andreas.prlic

https://libraries.io/pypi/DSSPparser python api interface

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written by Neo • Neo

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