human Natural Antisense Transcript database
does anybody know of a reliable database for human Natural Antisense Transcripts (NATs)?
I found a couple databases with google: NATsDB and antiCODE. Neither was updated recently and the download page of the former doesn't work, while the latter doesn't even have one.
I would like to see if there is an enrichment for such transcripts in some RNA-seq results and while I could perform an analysis to detect NATs, a database would be more straightforward.
0 answers
No answers yet.
Log in to answer this question.
More posts like this
-
Get chromosome sizes from fasta file
written by rioualen
-
Looking for ways to download ChIP-seq datasets programmatically in a pipeline
written by rioualen
-
Visualize location of genes on Chromosomes
written by kevluv93
-
[Solved] Problems merging TopHat mapped and unmapped BAMs for submission to ENA
written by Chris Cole
-
minor introns database
written by Martombo
-
prediction-free exon usage analysis
written by Assa Yeroslaviz
-
Cufflinks error - Processed 0 loci
written by wstfljs
also, if I understood correctly, Ensembl only classifies non-coding transcripts as "antisense", while NATs can also be protein-coding.