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question about protein GPI anchor site prediction

Hello everyone,

Does anyone who have used the software GPI-SOM to predict protein anchor site?

I used this software in command line and it was running normally, when I called it in a perl script ,errors appeared with Died at ./mapfill2A line 4, it seems that the software should run in the directory installed?

Do you have some suggests or other software,I know another software DGPI but I can't open the website?

Thank you very much!

gpi protein
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updated by Ram Ram • written by haust • haust

Hi! Have you found a solution? I couldn't use GPI-SOM because the library it requires seems to no longer be maintained... I am now trying to install ModPred, but I can't do it either...

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updated by Ram Ram • written by sdsilvapereira • sdsilvapereira

1 answer

Many years ago it was a topic of my work in Swiss-Prot.

Hopefully it may be helpful.

http://www.mpb.unige.ch/reports/rep_Natalia_Sernova.pdf

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written by natasha.sernova natasha.sernova

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