how to analyse methylation data from GEO? can GEO2R be used for methylation data if it is available? please suggest Thanks

Dear all, I have the [annotation file][1] annotation file from Arraystar database, that want to convert to the [circ Atlas ID][2]. Could you please let …

Hi all, I would like to examine and visualize the BAM file (from whole genome sequencing) in some HLA alleles; could you please let me …

Dear friend, I want to analyse some microarray data in TXT format. I analyse CEL format data previously, but this time I could hardly find …

Hi everyone, since I am new to Structural Variants, could someone please let me know how can I get access to the simulated data for …

Hi, I would like to know is there any available Scripts or Tools based on Support Vector Machine (SVM) for filtering the variants from NGS …

<p>Hi all,</p> <p>I&#39;m using Trim_galore tool for quality and adaptor trimming, but I found no option to remove poly T in the sequencing data resulted …

Hi guys, I've run qPCR validation of my RNAseq data to address the comments of one of the reviewers of my manuscript. I'm just a …

I want to analyse the RNA-seq (e.g., GSE50676, Illumina HiSeq 2000). But I don't know the difference between GEO data (`GSE50676_RAW.tar`) and the raw data …

I need to classify microarray data using WEKA tool. WEKA tool requires data in .arff format. How to get/preprocess any microarray data from GEO database …