Building a PST in R
I am trying to build a pst of a csv file in R, but facing with an error:
"Error in names(StCol) <- A "
After reading the file:
try1 <- read.csv("C:/Users/.../Desktop/sonuclar/2merCsv/Arteanuine B_2mer.csv")
data(try1)
Warning message: In data(try1) : data set 'try1' not found
This is the first error before using pstree function.
How can I handle with them?
The code I m trying to run is:
try1 <- read.csv("C:/Users/.../Desktop/sonuclar/2merCsv/Arteanuine B_2mer.csv")
data(try1)
try1.seq <- seqdef(try1)
try1.seq
Try1 <- pstree(tyr1.seq, L = 3)
print(Try1, digits = 3)
Try1
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atif.yilmaz7 •
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atif.yilmaz7 •
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IMHO, you don't need the
data()command. It is mainly used to attach (toy) data from libraries.Just try to run it without it.
After reading the csv, you should have a look at your data if everything is correctly assigned (e.g.
dim(try1);head(try1);summary(try1)).