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color according to column

Hello,

I have this data frame (y1) and I would like to plot with color according to column(meanhealthy) and (meancancer)

what I am doing here give me color to each element in the row,however I want all the point to be in group healthy vs cancer. Thanks for any answer

Associated.Gene.Name  meanhealthy  meancancer
                SCYL3             7.0786           5.879
                SCYL3              7.0786          5.879
                 SCYL3             7.0078          5.879
                SCYL3               7.0786          5.879

plot(y1$meanhealthy,y1$meancancer,col=c("blue","red"),pch=19,cex=0.3,)
r
• 1,456 views • link
updated by Ram Ram • written by yasjas • yasjas

I have a feeling this is more of an R question than a bioinformatics question.

• 1 views • link
written by Ram Ram

Why do you want to plot same gene 4 times?

• 1 views • link
written by PoGibas PoGibas

well,it is just part of my dataframe and for the repeated genes it s according to repeat elements,sorry I didnt include all my dataframe

• 1 views • link
written by yasjas • yasjas

Hello yasjas!

We believe that this post does not fit the main topic of this site.

Please move this post to http://stats.stackexchange.com/

For this reason we have closed your question. This allows us to keep the site focused on the topics that the community can help with.

If you disagree please tell us why in a reply below, we'll be happy to talk about it.

Cheers!

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written by Ram Ram

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