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Any database on cancer related snp information

Is there any database can make me find the cancer related snp information. I have tried CaSNP, but it not work at present. thanks!

snp

Try searching here on biostars.

Btw: CaSNP is not what you need - "CaSNP: a database for interrogating copy number alterations of cancer genome from SNP array data".

oh yes, you are right, thanks!

Heads up: ClinVar specializes in pathogenic germline mutations and is not a great resource for cancer mutations - not as good as COSMIC at least.

2 answers

  • cosmic: catalogue of somatic mutations.
  • CIViC: Clinical Interpretation of variants in cancer from washu.
  • DoCM: Database of curated mutations from washu.

Try COSMIC cancer database from Sanger Institute.

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