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Question: Calculate pair-wise dissimilarity of DNA sequences in Python
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Is there any available package in Python that can calculate dissimilarity between two DNA sequences using any alignment algorithm?

Thanks!

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Maybe find the similarity and use the complement?

ADD COMMENTlink 4.9 years ago RamRS 21k
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yes, but I would like to know if there is any library or script available out there.

ADD REPLYlink 4.9 years ago
songzewei
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I guess you could use EMBOSS needle or water wrapped in BioPython: http://biopython.org/DIST/docs/_api_159/Bio.Emboss.Applications-module.html

ADD REPLYlink 4.9 years ago
RamRS
21k

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