COGsoft error can't open _hash.tmp

Dear community,

I wish you all enjoy this fantastic new year. I was recently trying out COGsoft (April 2012 release) to identify orthology in a bunch of proteomes. I precisely followed the instructions in the readme file, but when I was running COGlse, it says Can't open input file ./data/tmp/_hash.tmp.

I figure that there is no such thing as tmp/ or _has.tmp throughout the procedures. So not sure why the program is looking for it. I wonder if anyone has met with this too? And how did you solve this? I appreciate any information.

Best regards

orthology cog blast

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updated 4.3 years ago by Ram

• written 11.6 years ago by qiyunzhu

I did not use COGlse so far, but using COGcognitor you have to create also an hash file. Maybe looking in the manual at the COGcognitor section could help you.

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updated 4.3 years ago by Ram

• written 11.5 years ago by dago

1 answer

You just need to make a new directory ./data/tmp/ in your working directory. The readme was a bad walkthrough.

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updated 4.3 years ago by Ram

• written 11.0 years ago by jk •