Biostar Beta. Not for public use.
GEO datasets for the eqtl analysis
0
Entering edit mode
6.0 years ago
P.NJ • 50
@P.NJ2961

Hello,

How can I extract all datasets from GEO relating to Alzheimer's samples from GEO for eqtl analysis ?

Thank you

GEO eqtl extract • 1.6k views
ADD COMMENTlink
0
Entering edit mode

Have you found datasets for which you have access to the SNP data (dbGaP data access) and that also have associated gene expression data? Just note that GEO does not have SNP data for human subjects (largely).

ADD REPLYlink
0
Entering edit mode

no I do not have access to dbGAP, I am using eqtl datasets available online

ADD REPLYlink

Login before adding your answer.

Similar Posts
Loading Similar Posts
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.3